Virus-X excellence in science is bearing fruit.

The Virus-X excellence in science is being recognized and a number of scientific publications supported by Virus-X are being published in high-impact scientific journals:

  1. Steinegger M, Söding J. MMseqs2 enables sensitive protein sequence searching for the analysis of massive data sets. Nat Biotechnol. 2017 Nov;35(11):1026-1028.
  2. Galiez C, Siebert M, Enault F, Vincent J, Söding J. WIsH: who is the host? Predicting prokaryotic hosts from metagenomic phage contigs. Bioinformatics. 2017 Oct 1;33(19):3113-3114
  3. Mirdita M, von den Driesch L, Galiez C, Martin MJ, Söding J, Steinegger M. Uniclust databases of clustered and deeply annotated protein sequences and alignments. Nucleic Acids Res. 2017 Jan 4;45(D1):D170-D176.
  4. Liu Y, Ishino S, Ishino Y, Pehau-Arnaudet G, Krupovic M, Prangishvili D. (2017) A novel type of polyhedral viruses infecting hyperthermophilic archaea. Journal of Virology 91(13): e00589-17.
  5. Prangishvili D, Bamford DH, Forterre P, Iranzo J, Koonin EV, Krupovic M. (2017) The enigmatic archaeal virosphere. Nature Reviews Microbiology 15: 724-739.
  6. Ptchelkine, S. Gillum, T. Mochizuki, S. Lucas-Staat, Y. Liu, M. Krupovic, S. E. V. Phillips, D. Prangishvili, and J. T. Huiskonen. 2017. Unique architecture of thermophilic archaeal virus APBV1 and its genome packaging. Nat. Commun. 8: 1436. X
  7. Krupovic M, Cvirkaite-Krupovic V, Iranzo J, Prangishvili D, Koonin E. (2018) Viruses of archaea: Structural, functional, environmental and evolutionary genomics. Virus Research 244:181-193.
  8. Wang Y, Chen B, Cao M, Sima L, Prangishvili D, Chen X, Krupovic M. (2018) Rolling-circle replication initiation protein of haloarchaeal sphaerolipovirus SNJ1 is homologous to bacterial transposases of the IS91 family insertion sequences. Journal of General Virology 99:416-421.
  9. Steinegger, M., and Soding, J. (2018) Clustering huge protein sequence sets in linear time.  Nature Commun., accepted. https://doi.org/10.1101/104034

 

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